Institutional Repository
Technical University of Crete
Technical University of Crete
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| URI: | http://purl.tuc.gr/dl/dias/0EE4DCC6-F128-4398-9942-4CCA20FA13F9 | ||
| Year | 2007 | ||
| Type of Item | Conference Publication | ||
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| Bibliographic Citation | E. Sotiriades and A. Dollas, "Design space exploration for the BLAST algorithm implementation," in 15th IEEE International Symposium on Field-Programmable Custom Computing Machines, 2007, pp. 323-326. doi: 10.1109/FCCM.2007.36 https://doi.org/10.1109/FCCM.2007.36 | ||
| Appears in Collections |
The most prevalent algorithm for DNA sequence matching is the BLAST algorithm. During recent years we have developed several FPGA-based architectures to speed up BLAST execution. In this work we present a new VLSI architecture as a followup to our reconfigurable logic-based architectures, and we compare the performance of several software and hardware implementations of BLAST.
Copyright © DIAS 2013
