Ιδρυματικό Αποθετήριο
Πολυτεχνείο Κρήτης
Πολυτεχνείο Κρήτης
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| URI: | http://purl.tuc.gr/dl/dias/5A92440D-9EC6-424D-8C28-7D9A1894513E | ||
| Έτος | 2006 | ||
| Τύπος | Δημοσίευση σε Συνέδριο | ||
| Άδεια Χρήσης |
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| Βιβλιογραφική Αναφορά | E. Sotiriades, C. Kozanitis and A. Dollas, "Some initial results on hardware BLAST acceleration with a reconfigurable architecture," in 20th International Parallel and Distributed Processing Symposium, 2006. doi: 10.1109/IPDPS.2006.1639532 https://doi.org/10.1109/IPDPS.2006.1639532 | ||
| Εμφανίζεται στις Συλλογές |
The BLAST algorithm is the prevalent tool that is used by molecular biologists for DNA sequence matching and database search. In this work we demonstrate that with an appropriate reconfigurable architecture, BLAST performance can be improved with a single-chip solution 5 times over a specialized and optimized computer cluster, or 37 times over a single computer. These initial results account for I/O and are very encouraging for the development of a large scale, reconfigurable BLAST engine.
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